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University of Tartu
Plant Ecology Laboratory
dehaze

Recent publications*

2017

Pärtel, M.; Öpik, M.; Moora, M.; Tedersoo, L.; Szava-Kovats, R.; Rosendahl, S.; Rillig, M. C.; Lekberg, Y.; Kreft, H.; Helgason, T.; Eriksson, O.; Davison, J.; de Bello, F.; Caruso, T. & Zobel M. 2017. Historical biome distribution and recent human disturbance shape the diversity of arbuscular mycorrhizal fungi. New Phytologist doi: 10.1111/nph.14695.

Barrio, I. C.; Lindén, E.; Te Beest, M.; Olofsson, J.; Rocha, A.; Soininen, E. M.; Alatalo, J. M.; Andersson, T.; Asmus, A.; Boike, J., Bråthen, K. A.; Bryant, J. P.; Buchwal, A.; Bueno, C. G.; Christie, K. S.; Denisova, Y. V.; Egelkraut, D.; Ehrich, D.; Fishback, L.; Forbes, B. C.; Gartzia, M.; Grogan, P., Hallinger, M.; Heijmans, M. M. P. D.; Hik, D. S.; Hofgaard, A.; Holmgren, M.; Høye, T. T.; HuebnerIngibjörg, D. C.; Jónsdóttir, S.; Kaarlejärvi, E.; Kumpula, T.; Lange, C. Y. M. J. G.; Lange, J.; Lévesque, E.; Limpens, J.; Macias-Fauria, M.;  Myers-Smith, I.; van Nieukerken, E. J.; Normand, S.; Post, E. S.; Schmidt, N. M.; Sitters, J.; Skoracka, A.; Sokolov, A.; Sokolova, N.; Speed, J. D. M.; Street, L. E.; Sundqvist, M. K.; Suominen, O.; Tananaev, N.; Tremblay, J.-P.; Urbanowicz, C.; Uvarov, S. A.; Watts, D.; Wilmking, M.; Wookey, P. A.; Zimmermann, H. H.; Zverev, V. & Kozlov, M. V. 2017. Background invertebrate herbivory on dwarf birch (Betula glandulosa-nana complex) increases with temperature and precipitation across the tundra biome. Polar Biology doi: 10.1007/s00300-017-2139-7.

Vasar, M.; Andreson, R.; Davison, J.; Jairus, T.; Moora, M.; Remm M.; Young, J. P. W.; Zobel, M. & Öpik, M. 2017. Increased sequencing depth does not increase captured diversity of arbuscular mycorrhizal fungi. Mycorrhiza doi: 10.1007/s00572-017-0791-y.

Bueno, C.G.; Moora, M.; Gerz, M.; Davison, J.; Öpik, M.; Pärtel, M.; Helm, A.; Ronk, A.; Kühn, I. & Zobel, M. 2017. Plant mycorrhizal status, but not type, shifts with latitude and elevation in Europe. Global Ecology and Biogeography 26: 690–699.

Ronk, A.; Szava-Kovats, R.; Zobel, M. & Pärtel, M. 2017. Observed and dark diversity of alien plant species in Europe: estimating future invasion risk. Biodiversity and Conservation 26: 899–916.

García de León, D.; Neuenkamp, L.; Gerz, M.; Oja, E. & Zobel, M. 2017. Secondary succession in alvar grasslands – do changes in vascular plant and cryptogam communities correspond? Folia Geobotanica doi: 10.1007/s12224-016-9260-1

Rodriguez-Echeverria, S.; Teixeira, H.; Correia, M.; Timoteo, S.; Heleno, R.; Öpik, M. &  Moora, M. 2017. Arbuscular mycorrhizal fungi communities from tropical Africa reveal strong ecological structure. New Phytologist 213: 380-390.

Menzel, A.; Hempel, S.; Klotz, S.; Moora, M.; Pyšek, P.; Rillig, M. C.; Zobel, M. & Kühn, I. 2017. Mycorrhizal status helps explain invasion success of alien plant species. Ecology 98: 92-102.

Lewis, R. J.; de Bello, F.; Bennett, J. A.; Fibich, P.; Finerty, G. E.; Götzenberger, L.; Hiiesalu, I.; Kasari, L.; Lepš, J.; Májeková, M.; Mudrák, O.; Riibak, K.; Ronk, A.; Rychtecká, T.; Vitová, A. & Pärtel, M. 2017. Applying the dark diversity concept to nature conservation. Conservation Biology 31: 40-47.

Koorem, K.; Tulva, I.; Davison, J.; Jairus, T.; Öpik, M.; Vasar, M.; Zobel, M. & Moora, M. 2017. Arbuscular mycorrhizal fungal communities in forest plant roots are simultaneously shaped by host characteristics and canopy-mediated light availability. Plant and Soil 410: 259-271.

 

2016

Hibbett, D.; Abarenkov, K.; Kõljalg, U.; Öpik, M.; Chai, B.; Cole, J. R.; Wang, Q.; Crous, P. W.; Robert, V. A. R. G.; Helgason, T.; Herr, J.; Kirk, P.; Lueschow, S.; O'Donnell, K.; Nilsson, H.; Oono, R.; Schoch, C. L.; Smyth, C.; Walker, D.; Porras-Alfaro, A.; Taylor, J. W. & Geiser, D. M. 2016. Sequence-based classification and identification of Fungi. Mycologia  108: 1049-1068.

Bennett, J. A.; Riibak, K.; Kook, E.; Reier, Ü.; Tamme, R.; Bueno, C. G. & Pärtel, M. 2016. Species pools, community completeness and invasion: disentangling diversity effects on the establishment of native and alien species. Ecology Letters, 19: 1496–1505.

Angel, R., Conrad, R., Dvorsky, M., Kopecky, M.; Kotilínek, M.; Hiiesalu, I.; Schweingruber, F.; Dolezal, J. The Root-Associated Microbial Community of the World’s Highest Growing Vascular Plants. Microbial Ecology 72: 394-406.

Barrio, I. C.; Hik, D. S; Jónsdóttir, I. S.; Bueno, C. G.; Mörsdorf, M.A. & Ravolainen, V. T. 2016. Herbivory Network: An international, collaborative effort to study herbivory in Arctic and alpine ecosystems. Polar Science 10: 297-302.

Bueno, C. G.; Williamson, S. N.; Barrio, I. C.; Helgadóttir, Á. & Hik, D. S. 2016. Moss Mediates the Influence of Shrub Species on Soil Properties and Processes in Alpine Tundra. PLoS ONE 11: e0164143.

Dolezal, J.; Dvorsky, M.; Kopecky, M.; Liancourt, P.; Hiiesalu, I.; Macek, M.; Altman, J.; Chlumska, Z.; Rehakova, K.; Capkova, K.; Borovec, J.; Mudrak, O.; Wild, J. & Schweingruber, F. 2016. Vegetation dynamics at the upper elevational limit of vascular plants in Himalaya. Scientific Reports 6: 24881.

Öpik, M., & Peay, K. G. 2016. Mycorrhizal diversity: Diversity of host plants, symbiotic fungi and relationships. Fungal Ecology 24: 103-105.

Tamme, R.; Gazol, A.; Price, J. N.; Hiiesalu, I. & Pärtel, M. 2016. Co-occurring grassland species vary in their responses to fine-scale soil heterogeneity. Journal of Vegetation Science 27: 1012–1022.

García de León, D.; Moora, M.; Öpik, M.; Jairus, T.; Neuenkamp, L.; Vasar, M.; Bueno, C.G.; Gerz, M.; Davison, J. & Zobel, M. 2016. Dispersal of arbuscular mycorrhizal fungi and plants during succession. Acta Oecologica 77: 128-135.

Ciccolini, V.; Ercoli, L.; Davison, J.; Vasar, M.; Öpik, M. & Pellegrino, E. 2016. Land-use intensity and host plant simultaneously shape the composition of arbuscular mycorrhizal fungal communities in a mediterranean drained peatland. FEMS Microbiology Ecology 92: fiw186.

Põlme, S.; Öpik, M.; Moora, M.; Zobel, M.; Kohout, P.; Oja, J.; Kõljalg, U. & Tedersoo, L. 2016. Arbuscular mycorrhizal fungi associating with roots of Alnus and Rubus in Europe and the Middle East. Fungal Ecology 24: 27-34.

Menzel, A.; Hempel, S.; Manceur, A. M.; Götzenberger, L.; Moora, M.; Rillig, M. C.; Zobel, M. & Kühn, I. 2016. Distribution patterns of arbuscular mycorrhizal and non-mycorrhizal plant species in Germany. Perspectives in Plant Ecology, Evolution and Systematics 21: 78-88.

Götzenberger, L.; Botta-Dukát, Z.; Lepš, J.; Pärtel, M.; Zobel, M. & de Bello, F. 2016. Which randomizations detect convergence and divergence in trait-based community assembly? A test of commonly used null models. Journal of Vegetation Science 27: 1275-1287.

Barrio, I. C.; Bueno, C. G.; Gartzia, M.; Soininen, E. M.; Christie, K. S.; Speed, J. D. M.; Ravolainen, V. T.; Forbes, B. C.; Gauthier, G.; Horstkotte, T.; Hoset, K. S.; Høye, T. T.; Jónsdóttir, I. S.; Lévesque, E.; Mörsdorf, M. A.; Olofsson, J.; Wookey, P. A. & Hik, D. S. 2016. Biotic interactions mediate patterns of herbivore diversity in the Arctic. Global Ecology and Biogeography 25: 1108–1118.

Neuenkamp, L.; Lewis, R.; Koorem, K.; Zobel, K. & Zobel, M. 2016. Changes in dispersal and light capturing traits explain post abandonment community change in semi-natural grasslands. Journal of Vegetation Science 27: 1222-1232.

Öpik, M. & Davison, J. 2016. Uniting species- and community-oriented approaches to understand arbuscular mycorrhizal fungal diversity. Fungal Ecology 24: 106-113.

Balint, M.; Bahram, M.; Eren, A.M., Faust, K.; Fuhrman, J.A.; Lindahl, B.; O'Hara, R.O.; Öpik, M.; Sogin, M.L.; Unterseher, M. & Tedersoo, L. 2016. Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes. FEMS Microbiology Reviews 40: 686-700.

Herrmann, L.; Lesueur, D.; Bräu, L.; Davison, J.; Jairus, T.; Robain, H.; Robin, A.; Vasar, M.; Wiriyakitnateekul, W. & Öpik, M. 2016. Diversity of root-associated arbuscular mycorrhizal fungal communities in a rubber tree plantation chronosequence in Northeast Thailand. Mycorrhiza 26: 863-877.

Pärtel, M., Bennett, J. A. & Zobel, M. 2016. Macroecology of biodiversity: disentangling local and regional effects. New Phytologist 211: 404–410.

Moora, M.; Öpik, M.; Davison, J.; Jairus, T.; Vasar, M.; Zobel, M. & Eckstein, R.L. 2016. AM fungal communities inhabiting the roots of submerged aquatic plant Lobelia dortmanna are diverse and include a high proportion of novel taxa. Mycorrhiza 26: 735-745.

Garcia de Leon, D.; Moora, M.; Öpik, M.; Neuenkamp, L.; Gerz, M.; Jairus, T.; Vasar, M.; Bueno, C. G.; Davison, J. & Zobel, M. 2016. Symbiont dynamics during ecosystem succession: co-occurring plant and arbuscular mycorrhizal fungal communities. FEMS Microbiology Ecology doi:92: fiw097.

Thiery, O.; Vasar, M.; Jairus, T.; Davison, J.; Roux, C.; Kivistik, P.-A.; Metspalu, A.; Milani, L.; Saks, Ü.; Moora, M.; Zobel, M. & Öpik, M. 2016.Sequence variation in nuclear ribosomal small subunit, internal transcribed spacer and large subunit regions of Rhizophagus irregularis and Gigaspora margarita is high and isolate-dependent. Molecular Ecology 25: 2816-2832.

Adamcík, S.; Slovák, M.; Eberhardt, U.; Ronikier, A.; Jairus, T.; Hampe, F. & Verbeken, A. 2016. Molecular inference, multivariate morphometrics and ecological assessment are applied in concert to delimit species in the Russula clavipes complex. Mycologia doi:108: 716-730.

Gazol, A.; Zobel, M.; Cantero, J.J.;  Davison, J.; Esler, K.J.; Jairus, T.; Öpik, M.; Vasar, M. & Moora, M. 2016. Impact of alien pines on local arbuscular mycorrhizal fungal communities – evidence from two continents. FEMS Microbiology Ecology doi:92: fiw073.

Öpik, M.; Davison, J.; Moora, M.; Pärtel, M. & Zobel, M. 2016. Response to Comment on Global assessment of arbuscular mycorrhizal fungus diversity reveals very low endemism. Science 351826.

Zobel, M. 2016. The species pool concept as a framework for studying patterns of plant diversity. Journal of Vegetation Science 27: 8-18.

Davison, J.; Moora, M.; Jairus, T.; Vasar, M.; Öpik, M. & Zobel, M. 2016. Hierarchical assembly rules in arbuscular mycorrhizal (AM) fungal communities. Soil Biology and Biochemistry 97: 63-70.

Pither, J.; Fraser, L. H.; Jentsch, A.; Sternberg, M.; Zobel, M.; Cahill, J.; Beierkuhnlein, C.; Bartha, S.; Bennett, J. A.; Boldgiv, B.; Brown, L. R.; Cabido, M.; Campetella, G.; Carlyle, C. N.; Chelli, S.; Csergo, A. M.; Diaz, S.; Enrico, L.; Ensing, D.; Fidelis, A.; Garris, H. W.; Henry, H. A. L.; Höhn, M.; Klironomos, J.; Koorem, K.; Lawrence-Lodge, R.; Manning, P.; Mitchell, R. J.; Moora, M.; Pillar, V. D.; Stotz, G. C.; Sugiyama, S.; Szentes, S; Tungalag, R.; Undrakhbold, S.; Wellstein, C. & Zupo, T. 2016. Response to Comment on „Worldwide evidence of a unimodal relationship between productivity and plant species richness.“ Science 351: 457.

Gartzia M.; Pérez-Cabello, F.; Bueno, C. G. & Alados, C. L. 2016. Physiognomic and physiologic changes in mountain grasslands in response to environmental and anthropogenic factors. Applied Geography 66: 1-11.

Selosse, M. A., Vincenot, L. & Öpik, M. 2016. Data processing can mask biology: towards better reporting of fungal barcoding data? New Phytologist 210: 1159-1164.

Castellanos-Frías, E., Garcia De León, D., Bastida, F. & Gonzalez-Andujar, J. L. 2016. Predicting global geographical distribution of Lolium rigidum (rigid ryegrass) under climate change. The Journal of Agricultural Science 154: 755-764.

Gerz, M.Bueno, C. G., Zobel, M. Moora, M. 2016. Plant community mycorrhization in temperate forests and grasslands: relations with edaphic properties and plant diversity. Journal of Vegetation Science 27: 89-99.

Barrio, I.C, Bueno, C. G. & Hik, D.S. 2016. Warming the tundra: reciprocal responses of invertebrate herbivores and plants. Oikos 125: 20-28.

 

2015

Wasof, S., Lenoir, J., Aarrestad, P. A., Alsos, I. G., Armbruster, W. S., Austrheim, G., Bakkestuen, V., Birks, H. J. B., Bråthen, K. A., Broennimann, O., Brunet, J., Bruun, H. H., Dahlberg, C. J., Diekmann, M., Dullinger, S., Dynesius, M., Ejrnæs, R., Gégout, J.-C., Graae, B. J., Grytnes, J.-A., Guisan, A., Hylander, K., Jónsdóttir, I. S., Kapfer, J., Klanderud, K., Luoto, M., Milbau, A., Moora, M., Nygaard, B., Odland, A., Pauli, H., Ravolainen, V., Reinhardt, S., Sandvik, S. M., Schei, F. H., Speed, J. D. M., Svenning, J.-C., Thuiller, W., Tveraabak, L. U., Vandvik, V., Velle, L. G., Virtanen, R., Vittoz, P., Willner, W., Wohlgemuth, T., Zimmermann, N. E., Zobel, M. & Decocq, G. 2015. Disjunct populations of European vascular plant species keep the same climatic niches. Global Ecology and Biogeography 24: 1401-1412.

Davison, J., Moora, M., Öpik, M., Adholeya, A., Ainsaar, L., Bâ, A., Burla, S., Diedhiou, A.G., Hiiesalu, I., Jairus, T., Johnson, N.C., Kane,A., Koorem, K., Kochar, M., Ndiaye, C., Pärtel, M., Reier, Ü., Saks, Ü., Singh, R., Vasar, M. & Zobel M. 2015. Global assessment of arbuscular mycorrhizal fungus diversity reveals very low endemism. Science 349: 970-973.

Fraser, L.H., Pither, J., Jentsch, A., Sternberg, M., Zobel, M., Askarizadeh, D., Bartha, S., Beierkuhnlein, C., Bennett, J.A., Bittel, A., Boldgiv, B., Boldrini, I.I., Bork, E., Brown, L., Cabido, M., Cahill, J., Carlyle, C.N., Campetella, G., Chelli, S., Cohen, O., Csergo, A.-M., Díaz, S., Enrico, L., Ensing, D., Fidelis, A., Fridley, J.D., Foster, B., Garris, H., Goheen, J.R., Henry, H.A.L., Hohn, M., Jouri, M.H., Klironomos, J., Koorem, K., Lawrence-Lodge, R., Long, R., Manning, P., Mitchell, R., Moora, M., Müller, S.C., Nabinger, C., Naseri, K., Overbeck, G.E., Palmer, T.M., Parsons, S., Pesek, M., Pillar, V.D., Pringle, R.M., Roccaforte, K., Schmidt, A., Shang, Z., Stahlmann, R., Stotz, G.C., Sugiyama, S., Szentes, S., Thompson, D., Tungalag, R., Undrakhbold, S., van Rooyen, M., Wellstein, C., Wilson, J.B. & Zupo, T. 2015. Worldwide evidence of a unimodal relationship between productivity and plant species richness. Science 349: 302-305.  

Garcia de Leon, D., Garcia-Mozo, H., Galan, C., Alcazar, P., Lima, M. & Gonzalez-Andujar, J. L. 2015. Disentangling the effects of feedback structure and climate on Poaceae annual airborne pollen fluctuations and the possible consequences of climate change. Science of The Total Environment 530-531:103-109.

Dickie, I.A., Alexander, I., Lennon, S., Öpik, M., Selosse, M.A., van der Heijden, M.G.A. & Martin F.M. 2015. Evolving insights to understanding mycorrhizas. New Phytologist 205:1369-1374

Hart, M.M., Aleklett, K., Chagnon, P.L., Egan, C., Ghignone, S., Helgason, T., Lekberg, Y., Öpik, M., Pickles, B.J & Waller, L. 2015. Navigating the labyrinth: A guide to sequence-based, community ecology of arbuscular mycorrhizal fungi. New Phytologist 207: 235-247

Herr, J.R., Öpik, M. & Hibbett, D.S. 2015. Towards the unification of sequence-based classification and sequence-based identification of host-associated microorganisms. New Phytologist 205: 27-31

Pellegrino, E., Öpik, M., Bonari, E & Ercoli, L. 2015. Responses of wheat to arbuscular mycorrhizal fungi: A meta-analysis of field studies from 1975 to 2013. Soil Biology & Biochemistry 84: 210-217

Varela-Cervero, S., Vasar, M., Davison, J., Barea, J.M., Öpik, M. & Azcon-Aguilar, C. 2015. The composition of arbuscular mycorrhizal fungal communities differs among the roots, spores and extraradical mycelia associated with five Mediterranean plant species. Environmental Microbiology 17: 2882–2895

Grilli, G., Urcelay, C., Galetto, L., Davison, J.Vasar, M.Saks, Ü.Jairus, T. & Öpik, M. 2015. The composition of arbuscular mycorrhizal fungal communities in the roots of a ruderal forb is not related to the forest fragmentation process. Environmental Microbiology 17: 2709–2720.

2014

Moora, M., Davison, J., Öpik, M., Metsis, M., Saks, Ü., Jairus, T., Vasar, M. & Zobel, M. 2014. Anthropogenic land use shapes the composition and phylogenetic structure of soil arbuscular mycorrhizal fungal communities. FEMS Microbiology Ecology 90: 609-621.

Ohsowski, B.M., Zaitsoff, P.D., Öpik, M., Hart, M.M. 2014. Where the wild things are: looking for uncultured Glomeromycota. New Phytologist 204: 171-179.

Tamme, R., Götzenberger, L., Zobel, M., Bullock, J.M., Hooftman, D.A.P., Kaasik, A., Pärtel, M. 2014. Predicting species' maximum dispersal distances from simple plant traits. Ecology 95: 505-513.

Kalwij, J.M., Robertson, M.P., Ronk, A., Zobel, M., Pärtel, M. 2014. Spatially-explicit estimation of geographical representation in large-scale species distribution datasets. PLoS ONE 9: e85306.

Breeze, T.D., Vaissière, B.E., Bommarco, R., Petanidou, T., Seraphides, N., Kozák, L., Scheper, J., Biesmeijer, J.C., Kleijn, D., Gyldenkærne, S., Moretti, M., Holzschuh, A., Steffan-Dewenter, I., Stout, J.C., Pärtel, M., Zobel, M., Potts, S.G.  2014. Agricultural policies exacerbate honeybee pollination service supply-demand mismatches across Europe. PLoS ONE 9: e82996.

Moora, M. 2014. Mycorrhizal traits and plant communities: perspectives for integration. Journal of Vegetation Science 25: 1126-1132.

Veresoglou, S.D., Powell, J.R., Davison, J., Lekberg, Y., Rillig, M.C. 2014. The Leinster and Cobbold indices improve inferences about microbial diversity. Fungal Ecology 11: 1-7.

Zobel, M., Öpik, M. 2014. Plant and arbuscular mycorrhizal fungal (AMF) communities - which drives which? Journal of Vegetation Science 25: 1133-1140.

Hiiesalu, I., Pärtel, M., Davison, J., Gerhold, P., Metsis, M., Moora, M., Öpik, M., Vasar, M., Zobel, M., Wilson, S.D. 2014. Species richness of arbuscular mycorrhizal fungi: associations with grassland plant richness and biomass. New Phytologist 203: 233-244.

Koorem, K., Gazol, A., Öpik, M., Moora, M., Saks, Ü., Uibopuu, A., Sõber, V., Zobel, M. 2014. Soil nutrient content influences the abundance of soil microbes but not plant biomass at the small-scale. PLoS ONE 9: e91998.

Willerslev, E., Davison, J., Moora, M., Zobel, M., Coissac, E., Edwards, M.E., Lorenzen, E.D., Vestergard, M., Gussarova, G., Haile, J., Craine, J., Gielly, L., Boessenkool, S., Epp, L.S., Pearman, P.B., Cheddadi, R., Murray, D., Brathen, K.A., Yoccoz, N., Binney, H., Cruaud, C., Wincker, P., Goslar, T., Alsos, I.G., Bellemain, E., Brysting, A.K., Elven, R., Sonstebo, J.H., Murton, J., Sher, A., Rasmussen, M., Ronn, R., Mourier, T., Cooper, A., Austin, J., Moller, P., Froese, D., Zazula, G., Pompanon, F., Rioux, D., Niderkorn, V., Tikhonov, A., Savvinov, G., Roberts, R.G., MacPhee, R.D.E., Gilbert, M.T., Kjaer, K.H., Orlando, L., Brochmann, C., Taberlet, P. 2014. Fifty thousand years of Arctic vegetation and megafaunal diet. Nature 506: 47-51.

Heleno, R., Garcia, C., Jordano, P., Traveset, A., Gómez, J.M., Blüthgen, N., Memmott, J., Moora, M., Cerdeira, J., Rodríguez-Echeverría, S., Freitas, H., Olesen, J.M. 2014. Ecological networks: delving into the architecture of biodiversity. Biology Letters 10: 20131000

Öpik, M., de Bello, F., Price, J.N., Fraser, L.H. 2014. New insights into vegetation patterns and processes. New Phytologist 201: 383-387. 

Öpik, M., Davison, J., Moora, M. & Zobel, M. 2014. DNA-based detection and identification of Glomeromycota: the virtual taxonomy of environmental sequences. Botany 92: 135-147.

Saks, Ü., Davison, J. Öpik, M., Vasar, M., Moora, M. & Zobel, M. 2014. Root-colonizing and soil-borne communities of arbuscular mycorrhizal fungi in a temperate forest understorey. Botany 92: 277-285.

Metsoja, J.-A., Neuenkamp, L. & Zobel, M. 2014. Seed bank and its restoration potential in Estonian flooded meadows. Applied Vegetation Science 17: 262-273.

 

2013

Pellissier, L., Pinto-Figueroa, E., Niculita-Hirzel, H., Moora, M., Villard, L., Goudet, J., Guex, N., Pagni, M., Xenarios, I., Sanders, I., Guisan, A. 2013. Plant species distributions along environmental gradients: do belowground interactions with fungi matter? Frontiers in Plant Science DOI: 10.3389/fpls.2013.00500

Bennett, A.E., Daniell, T.J., Öpik, M., Davison, J., Moora, M., Zobel, M., Selosse, M.A., Evans, D. 2013. Arbuscular mycorrhizal fungal networks vary throughout the growing season and between successional stages. PLoS ONE 8: e83241.

Marmeisse, R., Nehls, U., Öpik, M., Selosse, M.-A. & Pringle, A. 2013. Bridging mycorrhizal genomics, metagenomics and forest ecology. New Phytologist 198: 343 - 346.

Neuenkamp, L., Metsoja, J.-A., Zobel, M. & Hölzel, N. 2013. Impact of management on biodiversity-productivity relations in Estonian flooded meadows. Plant Ecology 214: 845-856. 

Lenoir, J., Graae., B.J., Aarrestad, P.A., Alsos, I.G., Armbruster, W.S., Austrheim, G., Bergendorff, C.,  Birks, H.J.B, Bråthen, K.A., Brunet, J., Bruun, H.H., Dahlberg, C.J., Decocq, G., Diekmann, M., Dynesius, M., Ejrnæs, R., Grytnes, J.-A., Hylander, K., Klanderud, K., Luoto, M., Milbau, A., Moora, M., Nygaard, B., Odland, A., Ravolainen, V.T., Reinhardt, S., Sandvik, S.M., Schei, F.H., Speed, J.D.M., Tveraabak, L.U., Vandvik, V., Velle, L.G., Virtanen, R., Zobel, M. & Svenning J.-C. 2013. Local temperatures inferred from plant communities suggest strong spatial buffering of climate warming across Northern Europe. Global Change Biology 19: 1470-1481.

Aavik, T., Holderegger, R., Edwards, P.J., Billeter, R. 2013. Patterns of contemporary gene flow suggest low functional connectivity of grasslands in a fragmented agricultural landscape. Journal of Applied Ecology 50: 395-403.

Öpik, M., Zobel, M., Cantero. J.J., Davison, J., Facelli, J.M., Hiiesalu, I., Jairus, T., Kalwij, J.M., Koorem, K., Leal, M.E., Liira, J., Metsis, M., Neshataeva, V., Paal, J., Phosri, C., Põlme, S., Reier, Ü., Saks, Ü., Schimann, H., Thiery, O., Vasar, M. & Moora, M. 2013. Global sampling of plant roots expands the described molecular diversity of arbuscular mycorrhizal fungi. Mycorrhiza 23: 411-430.

Hempel, S., Götzenberger, L., Kühn, I., Michalski, S.G., Rillig, M.C., Zobel, M. & Moora, M. 2013. Mycorrhizas in the Central European flora - relationships with plant life history traits and ecology. Ecology 94: 1389-1399.

 

2012

Thiéry, O., Moora, M., Vasar, M., Zobel, M. & Öpik, M. 2012. Inter- and intrasporal nuclear ribosomal gene sequence variation within one isolate of arbuscular mycorrhizal fungus, Diversispora sp. Symbiosis 58: 135-147.

Nielsen, A., Dauber, J., Kunin, W.E., Lamborn, E., Jauker, B., Moora, M., Potts, S.G., Reitan, T., Roberts, S., Sõber, V., Settele, J., Steffan-Dewenter, I., Stout, J.C., Tscheulin, T., Vaitis, M., Vivarelli, D., Biesmeijer J.C. & Petanidou, T. 2012. Pollinator community responses to the spatial population structure of wild plants: A pan-European approach. Basic and Applied Ecology 13: 489-499. 

Koorem, K., Saks, Ü., Sõber, V., Uibopuu, A., Öpik, M., Zobel, M. & Moora, M. 2012. Effects of arbuscular mycorrhiza on community composition and seedling recruitment in temperate forest understory. Basic and Applied Ecology 13: 663-672.

Rünk, K., Zobel, M. & Zobel, K. 2012. Biological Flora of the British Isles: Dryopteris carthusiana, D. dilatata and D. expansa. Journal of Ecology 100: 1039-1063.

Davison, J., Öpik, M., Zobel, M., Vasar, M., Metsis, M. & Moora, M. 2012. Communities of Arbuscular Mycorrhizal Fungi Detected in Forest Soil Are Spatially Heterogeneous but Do Not Vary throughout the Growing Season. PLoS ONE 7(8): e41938.

Guerrero, I., Morales, M.l B., Oñate, J. J., Geiger, F., Berendse, F., Snoo, G. de, Eggers, S., Pärt, T., Bengtsson, J., Clement, L. W., Weisser, W. W., Olszewski, A., Ceryngier, P., Hawro, V., Liira, J., Aavik, T., Fischer, C., Thies, C. & Tscharntke, T. 2012. Response of ground-nesting farmland birds to agricultural intensification across Europe: Landscape and field level management factors. Biological Conservation 152: 74 - 80.

Pärtel, M., Hiiesalu, I., Öpik, M. & Wilson, S.D. 2012. Belowground plant species richness: new insights from DNA-based methods. Functional Ecology 26: 775-782.

de Bello, F., Price, J.N., Münkemüller, T., Liira, J., Zobel, M., Thuiller, M., Gerhold, P., Götzenberger, L., Lavergne, S., Lepš, J., Zobel, K & Pärtel, M. 2012. Functional species pool framework to test for biotic effects on community assembly. Ecology 93: 2263-2273.

Liira, J., Ingerpuu, N., Kalamees, R., Moora, M., Pärtel, M., Püssa, K., Roosaluste, E., Saar, L., Tamme, R., Zobel, K. & Zobel, M. 2012. Grassland diversity under changing productivity and the underlying mechanisms – results of a 10-yr experiment. Journal of Vegetation Science 23: 919-930.

Öpik, M. & Moora, M. 2012. Missing nodes and links in mycorrhizal networks. New Phytologist 194: 304-306.

Graae, B.J., De Frenne, P., Kolb A., Brunet, J., Chabrerie, O., Verheyen, K., Pepin, N., Heinken, T., Zobel, M., Shevtsova, A., Nijs, I. & Milbau A. 2012. On the use of weather data in ecological studies along altitudinal and latitudinal gradients. Oikos 121: 3-19.

Uibopuu, A., Moora, M., Öpik, M. & Zobel, M. 2012. Temperate forest understorey species performance is altered by local arbuscular mycorrhizal fungal communities from stands of different successional stages. Plant and Soil 356: 331-339.

Metsoja, J.-A., Neuenkamp, L., Pihu, S., Vellak, K., Kalwij, J.M. & Zobel, M. 2012. Restoration of flooded meadows in Estonia- vegetation changes and management indicators. Applied Vegetation Science 15: 231-244.

Hiiesalu, I., Öpik, M., Metsis, M., Lilje, L., Davison, J., Vasar, M., Moora, M., Zobel, M., Wilson, S.D. & Pärtel, M. 2012. Plant species richness belowground: higher richness and new patterns revealed by next-generation sequencing. Molecular Ecology 21: 2004-2016.

Szava-Kovats, R., Zobel, M. & Pärtel, M. 2012. The local-regional species richness relationship: new perspectives on the null-hypothesis. Oikos 121: 321-326. 

Götzenberger, L., de Bello , F., Bråthen, K. A., Davison, J., Dubuis, A., Guisan, A., Lepš, J., Lindborg, R., Moora, M., Pärtel, M., Pellissier, L., Pottier, J., Vittoz, P., Zobel, K. & Zobel, M. 2012. Ecological assembly rules in plant communities- approaches, patterns and prospects. Biological Reviews 87: 111-127

Aavik, T., Edwards, J.P., Holderegger, R., Graf, R. & Billeter, R. 2012Genetic consequences of using seed mixtures in restoration: A case study of a wetland plant Lychnis flos-cuculi. Biological Conservation 145: 195-204.

Semchenko, M., Lepik, M., Götzenberger, L. & Zobel, K. 2012Positive effect of shade on plant growth: amelioration of stress or active regulation of growth rate? Journal of Ecology 100: 459-466.

 

2011

 

Koorem, K., Price, J.N. & Moora, M. 2011. Species-specific effects of woody litter on seedling emergence and growth of herbaceous plants. PLoS ONE 6(10): e26505.

Potts, S.G., Biesmeijer, J.C., Bommarco, R., Felicioli, A., Fischer, M., Jokinen, P., Kleijn, D., Klein, A.M., Kunin, W.E., Neumann, P., Penev, L.D., Petanidou, T., Rasmont, P., Roberts, S.P.M., Smith, H.G., Sorensen, P.B., Steffan-Dewenter, I., Vaissiere, B.E., Vila, M., Vujic, A., Woyciechowski, M., Zobel, M., Settele, J., Schweiger, O. 2011Developing European conservation and mitigation tools for pollination services: approaches of the STEP (Status and Trends of European Pollinators) project. Journal of Apicultural Research 50: 152-164.

Pärtel, M., Szava-Kovats, R. & Zobel, M. 2011. Discerning the niche of dark diversity. Trends in Ecology and Evolution 26: 265-266.

Guerrero, I., Morales, M., Onante, J.J., Aavik, T., Bengtsson, J., Berendse, F., Clement, L., Dennis, C., Eggers, S., Emmerson, M., Fischer, C., Flohre, A., Geiger, F., Hawro, V., Inchausti, P., Kalamees, A., Kinks, R., Liira, J., Melendez, L., Pärt, T., Thies, C., Tscharntke, T., Olszewski, A. & Weisser, W. 2011Taxonomic and functional diversity of farmland bird communities across Europe: effects of biogeography and agricultural intensification. Biodiversity and Conservation 20: 3663-3681.

Davison, J., Öpik, M., Daniell, T.J., Moora, M. & Zobel, M. 2011Arbuscular mycorrhizal fungal communities in plant roots are not random assemblages. FEMS Microbiology Ecology 78: 103-115.

Klironomos, J., Zobel, M., Tibbett, M., Stock, W. D., Rillig, M. C., Parrent, J. L., Moora, M., Koch, A. M., Facelli, J. M., Facelli, E., Dickie, I. A. & Bever, J. D. 2011Forces that structure plant communities: quantifying the importance of the mycorrhizal symbiosis. New Phytologist 189: 366-370.

Moora, M., Berger, S., Davison, J., Öpik, M., Bommarco, R., Bruelheide, H., Kühn, I., Kunin, W.E., Metsis, M., Rortais, A., Vanatoa, A., Vanatoa, E., Stout, J.C., Truusa, M., Westphal, C., Zobel, M. & Walther, G.-R. 2011Alien plants associate with widespread generalist arbuscular mycorrhizal fungal taxa: evidence from a continental-scale study using massively parallel 454 sequencing. Journal of Biogeography 38: 1305-1317.

Powell, J.R., Monaghan, M.T., Öpik, M. & Rillig, M.C. 2011Evolutionary criteria outperform operational approaches in producing ecologically relevant fungal species inventories. Molecular Ecology 20: 655-666.

Flohre, A., Fischer, C., Aavik, T., Bengtsson, J., Berendse, F., Bommarco, R., Ceryngier, P., Clement, L.W., Dennis, C., Eggers, S., Emmerson, M., Geiger, F., Guerrero, I., Hawro, V., Inchausti, P., Liira, J., Morales, M.B., Oñate, J.J., Pärt, T., Weisser, W.W., Winqvist, C., Thies, C. & Tscharntke, T. 2011Agricultural intensification and biodiversity partitioning in European landscapes comparing plants, carabids, and birds. Ecological Applications 21: 1772-1781.

Unterseher, M., Jumpponen, A., Öpik, M., Tedersoo, L., Moora, M., Dormann, CF. & Schnittler, M. 2011Species abundance distributions and richness estimations in fungal metagenomics - lessons learned from community ecology. Molecular Ecology 20: 275-285.

Pärtel, M., Szava-Kovats, R., Zobel, M. 2011. Dark diversity: shedding light on absent species. Trends in Ecology & Evolution 26: 124-128.

Winqvist, C., Bengtsson, J., Aavik, T., Berendse, F., Clement, L. W., Eggers, S., Fischer, C., Flohre, A., Geiger, F., Liira, J., Pärt, T., Thies, C., Tscharntke, T., Weisser, W.W. & Bommarco, R. 2011Mixed effects of organic farming and landscape complexity on farmland biodiversity and biological control potential across Europe. Journal of Applied Ecology 48: 570-579.

Zobel, M., Otto, R., Laanisto, L., Naranjo-Cigala, A., Pärtel, M. & Fernández-Palacios, J.M. 2011. The formation of species pools: historical habitat abundance affects current local diversity. Global Ecology and Biogeography 20: 251-259.

Zobel, M., Szava-Kovats, R. & Pärtel, M. 2011. Regional influences on local species composition. Encyclopedia of Life Sciences, Wiley-Chapman, 1-6.

Liu, Y., He, J., Shi, G., An, L., Öpik, M. & Feng, H. 2011Diverse communities of arbuscular mycorrhizal fungi inhabit sites with very high altitude in Tibet Plateau. FEMS Microbiology Ecology 78: 355-365.

Kupper, P., Sõber, J., Sellin, A., Lõhmus, K., Tullus, A., Räim, O., Lubenets, K., Tulva, I., Uri, V., Zobel, M., Kull, O. & Sõber, A. 2011An experimental facility for Free Air Humidity Manipulation (FAHM) can alter water flux through deciduous tree canopy. Environmental and Experimental Botany 72: 432-438.

 

2010

Xiao, S., Zobel, M., Szava-Kovats, R. & Pärtel, M. 2010The effects of species pool, dispersal and competition on the diversity-productivity relationship. Global Ecology and Biogeography 19: 343-351.

Henle, K., Kunin, W., Schweiger, O., Schmeller, D.S., Grobelnik, V., Matsinos, Y., Pantis, J., Penev, L., Potts, S.G., Ring, I., Simila, J., Tzanopoulos, J., van den Hove, S., Baguette, M., Clobert, J., Excoffier, L., Framstad, E., Grodzinska-Jurczak, M., Lengyel, S., Marty, P., Moilanen, A., Porcher, E., Storch, D., Steffan-Dewenter, I., Sykes, M.T., Zobel, M. & Settele, J. 2010Securing the conservation of biodiversity across administrative levels and spatial, temporal, and ecological scales research needs and approaches of the SCALES project. GAIA - Ecological Perspectives for Science and Society 19: 187-193.

Schweiger, O., Biesmeijer, J.C., Bommarco, R., Hickler, T., Hulme, P.E., Klotz, S., Kuhn, I., Moora, M., Nielsen, A., Ohlemuller, R., Petanidou, T., Potts, S.G., Pysek, P., Stout, J.C., Sykes, M.T., Tscheulin, T., Vila, M., Walther, G.R, Westphal, C., Winter, M., Zobel, M. & Settele, J. 2010Multiple stressors on biotic interactions: how climate change and alien species interact to affect pollination. Biological Reviews 85: 777-795.

Harrison, P.A., Vandewalle, M., Sykes, M.T., Berry, P.M., Bugter, R., de Bello, F., Feld, C.K., Grandin, U., Harrington, R., Haslett, J.R., Jongman, R.H.G., Luck, G.W., da Silva, P.M., Moora, M., Settele, J., Sousa, J.P. & Zobel, M. 2010Identifying and prioritising services in European terrestrial and freshwater ecosystems. Biodiversity and Conservation 19: 2791-2821.

Bever, J.D., Dickie, I.A., Facelli, E., Facelli, J.M., Klironomos, J., Moora, M., Rillig, M.C., Stock, W.D., Tibbett, M. & Zobel, M. 2010Rooting theories of plant community ecology in microbial interactions. Trends in Ecology & Evolution 25: 468-478.

Sõber, V., Moora, M. & Teder, T. 2010Florivores decrease pollinator visitation rate in a self-incompatible plant. Basic and Applied Ecology 11: 669-675.

Koorem, K. & Moora, M. 2010Positive association between understory species richness and a dominant shrub species (Corylus avellana) in a boreonemoral spruce forest. Forest Ecology and Management 260: 1407-1413.

Haslett, J.R., Berry, P.M., Bela, G., Jongman, R.H.G., Pataki, G., Samways, M.J. & Zobel, M. 2010Changing conservation strategies in Europe: a framework integrating ecosystem services and dynamics. Biodiversity and Conservation 19: 2963-2977.

De Frenne, P., Graae, B.J., Kolb, A., Brunet, J., Chabrerie, O., Cousins, S.A.O., Decocq, G., Dhondt, R., Diekmann, M., Eriksson, O., Heinken, T., Hermy, M., Jogar, U., Saguez, R., Shevtsova, A., Stanton, S., Zindel, R., Zobel, M. & Verheyen, K. 2010Significant effects of temperature on the reproductive output of the forest herb Anemone nemorosa L. Forest Ecology and Management 259: 809-817.

Harrington, R., Anton, C., Dawson, T.P., de Bello, F., Feld, C.K., Haslett, J.R., Kluvankova-Oravska, T., Kontogianni, A., Lavorel, S., Luck, G.W., Rounsevell, M.D.A., Samways, M.J., Settele, J., Skourtos, M. Spangenberg, J.H., Vandewalle, M., Zobel, M. & Harrison, P.A. 2010Ecosystem services and biodiversity conservation: concepts and a glossary. Biodiversity and Conservation 19: 2773-2790.

Öpik, M., Vanatoa, A., Vanatoa, E., Moora, M., Davison, J., Kalwij, J.M., Reier, Ü. & Zobel, M. 2010The online database MaarjAM reveals global and ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota). New Phytologist 188: 223-241.

Hammen, V. C., Biesmeijer, J. C., Bommarco, R., Budrys, E., Christensen, T. R., Fronzek, S., Grabaum, R., Jaksic, P., Klotz, S., Kramarz, P., Kröel-Dulay, G., Kühn, I., Mirtl, M., Moora, M., Petanidou, T., Pino , J., Potts, S. G., Rortais, A., Schulze, C. H., Steffan-Dewenter, I., Stout, J., Szentgyörgyi, H., Vighi, M., Vujic, A., Westphal, C., Wolf, T., Zavala, G., Zobel, M., Settele, J. & Kunin, W. E. 2010Establishment of a cross-European field site network in the ALARM project for assessing large-scale changes in biodiversity. Environmental Monitoring and Assessment 164: 337-348.

Zobel, M., Moora, M. & Herben, T. 2010Clonal mobility and its implications for spatio-temporal patterns of plant communities: what do we need to know next? Oikos 119: 802-806.

Krauss, J., Bommarco, R., Guardiola, M., Heikkinen, R., Helm, A., Kuussaari, M., Lindborg, R., Öckinger, E., Pärtel, M., Pino, J., Pöyry, J., Raatikainen, K., Sang, A., Stefanescu, C., Teder, T., Zobel, M. & Steffan-Dewenter, I. 2010Habitat fragmentation causes immediate and time-delayed biodiversity loss at different trophic levels. Ecology Letters 13: 597-605.

Geiger, F., Bengtsson, J., Berendse, F., Weisser, W.W., Emmerson, M., Morales, M.B., Ceryngier, P., Liira, J., Tscharntke, T., Winqvist, C., Eggers, S., Bommarco, R., Pärt, T., Bretagnolle, V., Plantegenest, M., Clement, L.W., Dennis, C., Palmer, C., Onate, J.J., Guerrero, I., Hawro, V., Aavik, T., Thies, C., Flohre, A., Hänke, S., Fischer, C., Goedhart, P.W. & Inchausti, P. 2010Persistent negative effects of pesticides on biodiversity and biological control potential on European farmland. Basic and Applied Ecology 11: 97-105.

Moora, M. & Zobel, M. 2010Arbuscular Mycorrhizae and Plant-Plant Interactions. Impact of Invisible World on Visible Patterns. In: Pugnaire, F.I. (ed.) Positive interactions and plant community dynamics. CRC PRES, Boca Raton, FL, USA, pp. 79-98.  

Pärtel, M., Zobel, K., Laanisto, L., Szava-Kovats, R. & Zobel, M. 2010The productivity-diversity relationship: varying aims and approaches. Ecology 91: 2565-2567.

Aavik, T & Liira, J. 2010Quantifying the effect of organic farming, field boundary type and landscape structure on the vegetation of field boundaries. Agriculture, Ecosystems & Environment 135: 178-186.

Knight, C.A., Clancy, R.B., Götzenberger, L., Dann, L., Beaulieu & J. M. 2010On the Relationship between Pollen Size and Genome Size. Journal of Botany pp. 1-7.

Rünk, K., Zobel, M. & Zobel, K. 2010Different factors govern the performance of three closely related and ecologically similar Dryopteris ferns with contrastingly different abundance in a transplant experiment. BOTANY-BOTANIQUE 88: 961-969.

 

* Enne 2010. aastat ilmunud publikatsioonid on kättesaadavad töörühma liikmete CV-dest.